Position Based Encoding Algorithm for DNA Compression using pre-defined Dictionary

  • Murugan. A, Punitha. K
Keywords: DNA sequence compression, Encryption, Data compression

Abstract

DNA (deoxyribonucleic Acid) tends to be the core essential component in every living organism. Specifically, the DNA sequencing expansion surpasses the expansion in storage capacity. The pre-requisite of reducing the DNA size calls out for additional storage. With the help of DNA Compression, the DNA size reduction can be minimized. And this can be achieved by adopting the recommended algorithm that results in DNA successions for bigger genome. The novel Position Based Encoding (PBE_DNA) compression algorithm significantly enhances implementation of rest of the previous DNA compression algorithms. Similarly, the approach of assigning binary bits (Unique BIT CODE) for certain segments of DNA arrangement has proven quite successful for computing of DNA compression. The proposed method yields 90% compression ratio, which is a better than the early work in this field.

Published
2021-09-04
How to Cite
Murugan. A, Punitha. K. (2021). Position Based Encoding Algorithm for DNA Compression using pre-defined Dictionary. Design Engineering, 5740- 5754. Retrieved from http://thedesignengineering.com/index.php/DE/article/view/4012
Section
Articles